BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D06LP1|AL429891
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1564 1408 0.0
3x_Contig1771 162 1e-39
3x_Contig1747 162 1e-39
3x_Contig1684 162 1e-39
3x_Contig1444 162 1e-39
3x_Contig753 150 4e-36
3x_Contig208 134 3e-31
>3x_Contig1564
Length = 11038
Score = 1408 bits (704), Expect = 0.0
Identities = 817/858 (95%), Gaps = 3/858 (0%)
Strand = Plus / Plus
Query: 1 aaggtggaaggaaatggtaaaaagaatggttcctagcgggatcgaaccgctgatccccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5315 aaggtggaaggaaatggtaaaaagaatggttcctagcgggatcgaaccgctgatccccgc 5374
Query: 61 gttattagcacggtgccttaaccaactgggccaakgaaccatatyttatggtttttcgta 120
|||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||
Sbjct: 5375 gttattagcacggtgccttaaccaactgggccaaggaaccagatcttatggtttttcgta 5434
Query: 121 tatttttcyaaactyatggctcatgttgtcgagacctctcaggaacaataatcgagtwgc 180
|||||||| ||||| ||||| |||| || ||||||| |||||||||||||||||||| ||
Sbjct: 5435 tatttttccaaactcatggcgcatggtggcgagaccgctcaggaacaataatcgagtagc 5494
Query: 181 taccaatctaattgacttataagtagcaatattttacatatacattcatcaaataataaa 240
|||||||||||||||| |||||||||||||| ||||||| |||| || | ||||| |||
Sbjct: 5495 taccaatctaattgacggataagtagcaatatgttacatagacatgcagctaataacaaa 5554
Query: 241 tattgattcatctgattctgaatatctagatctggtgttactgttacttaaatggttaga 300
||| |||||||||||||||||| ||| |||||||||| || || ||| |||||||||||
Sbjct: 5555 tatcgattcatctgattctgaagatccagatctggtggcac-gtgactgaaatggttaga 5613
Query: 301 taaaaaacatcaacatcttgacatctcacaggctgaatagaaccatatattccatcactt 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5614 taaaaaacatcaacatcttgacatctcacaggctgaagagaaccatatattccatcactt 5673
Query: 361 ttttttaagccatcattattccaaattaatgtttattagcatattatggccttagcaaaa 420
|||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 5674 ttttttaagcca-cattattccaaattaatgtttattagcatagga-ggccttagcaaaa 5731
Query: 421 ccacaagkccaccgctgtaactattccctgctgagaaacttttctccacaaaaaataagg 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5732 ccacaaggccaccgctgtaactattccctgctgagaaacttttctccacaaaaaataagg 5791
Query: 481 gcacaagtaagcaccagggtccaagacttgccttcacctatttttcctttttcctttcag 540
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 5792 gcacaagtaagcaccagggtccaagacttgccttcacctattgttcctttttccttgcag 5851
Query: 541 ttgttatcactctttttagggacccgcccctattaacattttccaatgttgacaaaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5852 ttgttatcactctttttagggacccgcccctattaacattttccaatgttgacaaaaaaa 5911
Query: 601 tcaggcttkaacattgaaaatggaagtcagtttttttttcatataaaaaattatagattk 660
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5912 tcaggcttgaacattgaaaatggaagtcagtttttttttcatataaaaaattatagattt 5971
Query: 661 ggtaaattaagtgctattcaatgaggtttacagcgttgagcrgggcaacaagaagcatag 720
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5972 ggtaaattaagtgctattcaatgaggtttacagcgttgagcagggcaacaagaagcatag 6031
Query: 721 tagttccaccaagctagggggttttatccttacatttattttttttkcatttcatagttc 780
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6032 tagttccaccaagctacggggttttatccttacatttattttttttgcatttcatagttc 6091
Query: 781 atccaagtggtgcacttttatcaattgtkagtgttgcattatttttttttacttcattct 840
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 6092 atccaagtggtgcacttttatcaattgtgagttttgcattatttttttttacttcattct 6151
Query: 841 gcctggacaaatttccat 858
||||||||||||||||||
Sbjct: 6152 gcctggacaaatttccat 6169
>3x_Contig1771
Length = 25932
Score = 162 bits (81), Expect = 1e-39
Identities = 82/83 (98%)
Strand = Plus / Minus
Query: 19 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12984 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 12925
Query: 79 taaccaactgggccaakgaacca 101
|||||||||||||||| ||||||
Sbjct: 12924 taaccaactgggccaaggaacca 12902
>3x_Contig1747
Length = 15671
Score = 162 bits (81), Expect = 1e-39
Identities = 82/83 (98%)
Strand = Plus / Minus
Query: 19 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7760 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 7701
Query: 79 taaccaactgggccaakgaacca 101
|||||||||||||||| ||||||
Sbjct: 7700 taaccaactgggccaaggaacca 7678
>3x_Contig1684
Length = 14609
Score = 162 bits (81), Expect = 1e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 19 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9464 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 9523
Query: 79 taaccaactgggccaakgaacca 101
|||||||||||||||| ||||||
Sbjct: 9524 taaccaactgggccaaggaacca 9546
>3x_Contig1444
Length = 7580
Score = 162 bits (81), Expect = 1e-39
Identities = 82/83 (98%)
Strand = Plus / Minus
Query: 19 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5749 aaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcct 5690
Query: 79 taaccaactgggccaakgaacca 101
|||||||||||||||| ||||||
Sbjct: 5689 taaccaactgggccaaggaacca 5667
>3x_Contig753
Length = 2743
Score = 150 bits (75), Expect = 4e-36
Identities = 76/77 (98%)
Strand = Plus / Minus
Query: 25 aatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgccttaacca 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 aatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgccttaacca 2006
Query: 85 actgggccaakgaacca 101
|||||||||| ||||||
Sbjct: 2005 actgggccaaggaacca 1989
>3x_Contig208
Length = 1357
Score = 134 bits (67), Expect = 3e-31
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 18 taaaaagaatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcc 77
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 taaaaataatggttcctagcgggatcgaaccgctgatccccgcgttattagcacggtgcc 1346
Query: 78 ttaaccaactg 88
|||||||||||
Sbjct: 1347 ttaaccaactg 1357
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8465
Number of Sequences: 1807
Number of extensions: 8465
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 7
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)